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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015872981.1_cds_XP_016434988.1_30997
CDS Infomation

[gene=LOC107761284] [db_xref=GeneID:107761284] [protein=protoporphyrinogen oxidase, mitochondrial-like isoform X2] [protein_id=XP_016434988.1] [location=join(144594..144596,144720..144785,144920..144970,145097..145153,146084..146154,146945..146981,147131..147196,147468..147508,147692..147824,148296..148475,148633..148707,149057..149180,149263..149371,149473..149547,149649..149755,150044..150156)] [gbkey=CDS]
Sequence

ATGACTGAAAGTGAAGGTGATGTTACATTTTTGATTGATTCTCTTGGACTCCGAGAAAAG
CAACAATTTCCACTTTCACAGAACAAGCGCTACATTGCCAGAAATGGTACTCCTGTACTG
TTACCTTCAAATCCAATTGACCTGATCAAAAGCAATTTTCTTTCCACTGGATCAAAGCTA
CAGCTGCTTTTGGAGCCACTTTTATGGAAGAATAAAAACCTCTCGAAGGTGTCTGACTCA
CACGAAAGTGTCAGTGGATTCTTCCAGCGTCATTTTGGAAAGGAGGTTGTTGACTATCTG
ATTGACCCTTTTGTTGCTGGAACGTGTGGTGGTGATCCTAACTCGCTTTCAATGCACCAT
TCATTTCCAGAGTTGTGGAATTTAGAGAAAAGGTTTGGCTCAGTCATAGTTGGGGCAATT
CGATCTAAGTTATCACCTAAAAAGGAAAAGAAGCAAGGACCACCGAAGACTTCAGCAAAT
AAGAAGCGCCAGCGGGGATCTTTTTCCTTCTTGGGCGGGATGCAAACACTTACTGACACA
ATATGCAAAGATCTCAGAGAAGATGAACTTAGGCTAAACTCTAGAGTTCTGGAATTATCT
TGTAGCTGTAATGAGGACTCTGCGATAGATAGCTGGTCAATTATTTCTGCCTCACCACAC
AAAAGGCAATCAGAAGAAGAATCATTTGATGCTGTAATTATGACGGCCCCACTCTGTGAT
GTTAAGGGTATGAAGATTGCTAAGAGAGGAAATCCTTTTCTACTCAACTTTCTTCCTGAG
GTTGATTATGTACCGCTATCTGTTGTTATAACCACATTTAAGAGGGAAAATGTAAAGCAT
CCCCTTGAGGGTTTTGGAGTTCTTGTACCTTCCAAGGAGCAACAACATGGTCTCAAGACA
CTAGGCACCCTCTTCTCTTGTATGATGTTTCCAGATCGGGCACCCAACAATGTTTATCTT
TATACTACTTTTGTTGGTGGAAGCCGAAATAGAGAACTCGCAAAAGCCTCAAGGACTGAG
CTGAAAGAGATAGTAACTTCTGACCTTAAGCAGTTGTTGGGAGCTGAAGGAGAGCCAACA
TATGTGAATCATCTATACTGGAGTAAAGCATTTCCATTGTATGGGCATAACTATGATTCA
GTCCTACATGCAATTGACAAAATGGAGAAAAACCTTCCTGGTTTATTCTATGCAGGTAAC
CACAAGGGGGGATTGTCAGTTGGCAAAGCATTATCTTCGGGATGCAACGCAGCAGATCTT
GTTATATCATATCTTGAGTCTGTGTCAGCTGACACCAAAAACCAGTGA

Peptide Sequence

PEP ID

XP_016434988.1
PEP Infomation

PREDICTED: protoporphyrinogen oxidase, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MTESEGDVTFLIDSLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKL
QLLLEPLLWKNKNLSKVSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPNSLSMHH
SFPELWNLEKRFGSVIVGAIRSKLSPKKEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDT
ICKDLREDELRLNSRVLELSCSCNEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCD
VKGMKIAKRGNPFLLNFLPEVDYVPLSVVITTFKRENVKHPLEGFGVLVPSKEQQHGLKT
LGTLFSCMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPT
YVNHLYWSKAFPLYGHNYDSVLHAIDKMEKNLPGLFYAGNHKGGLSVGKALSSGCNAADL
VISYLESVSADTKNQ

Transcript Sequence

Gene sequence data has not been registered.